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health-universe/pdbtofasta
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Converts amino acid residues from PDB files into a FASTA string

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Use Cases Limitations Evidence Owner's Insight

This app can convert PDB files to FASTA string. This is helpful for simplified representation, sequence comparison, database queries, inputs for bioinformatics tools, scripting or automation, and data integration.

The app may have restrictions on the input formats it can process. If the data does not adhere to the expected format, users may encounter issues or errors.

Based on the GitHub: https://github.com/rasbt/protein-science?tab=readme-ov-file#substructure-alignment-using-openeye-oechem-rmsd

Try it out with this PDB: https://www.rcsb.org/structure/3bv7

Stable

Warning: App may appear to work well but has not been peer reviewed. Not intended for clinical use. Use with caution.


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  • Drug Discovery & Development

Owner

Kinal Patel

Member since